Basic Statistics
Measure | Value |
---|---|
Filename | SRR3192657_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 93555584 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCGAACG | 11835 | 0.0 | 18.73978 | 3 |
TACCGCG | 17805 | 0.0 | 18.011116 | 1 |
CGGGTGT | 32700 | 0.0 | 17.838795 | 1 |
GTCCGAA | 14595 | 0.0 | 17.212843 | 1 |
CGAACGG | 10915 | 0.0 | 16.92551 | 4 |
AACGGTA | 10735 | 0.0 | 16.899632 | 6 |
TGCGTCG | 31995 | 0.0 | 15.808235 | 9 |
CGGTATA | 19350 | 0.0 | 15.045113 | 4 |
TAGATCG | 12370 | 0.0 | 15.01146 | 8 |
GCGGTGT | 45085 | 0.0 | 14.914068 | 2 |
CGGGGGA | 64000 | 0.0 | 14.801784 | 1 |
CGGGGTT | 58115 | 0.0 | 14.6714325 | 1 |
ACGTACG | 7885 | 0.0 | 14.515537 | 36-37 |
GCGGGTT | 21435 | 0.0 | 14.450414 | 1 |
ACTATCG | 14645 | 0.0 | 14.340783 | 58-59 |
GTGCGTC | 39765 | 0.0 | 13.8658695 | 8 |
CGTACGA | 8135 | 0.0 | 13.865127 | 36-37 |
CGCATTC | 41720 | 0.0 | 13.370871 | 94-95 |
CGGTGTG | 49610 | 0.0 | 13.354293 | 3 |
TGAGCGT | 64395 | 0.0 | 12.68505 | 8 |